STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl13Mitochondrial ribosomal protein L13. (190 aa)    
Predicted Functional Partners:
mrps9
Mitochondrial ribosomal protein S9.
  
 
 0.999
mrpl16
Mitochondrial ribosomal protein L16.
  
 0.999
ENSBSLP00000005948
Mitochondrial ribosomal protein L21.
  
 
 0.999
mrpl2
Mitochondrial ribosomal protein L2.
  
 0.999
mrpl4
Mitochondrial ribosomal protein L4.
  
 0.999
ENSBSLP00000013136
Mitochondrial ribosomal protein L36.
  
 
 0.999
mrpl15
Mitochondrial ribosomal protein L15.
  
 0.999
mrpl22
Mitochondrial ribosomal protein L22.
  
 0.999
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.999
mrps12
Mitochondrial ribosomal protein S12.
 
 0.999
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.