STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
casp2Caspase 2. (455 aa)    
Predicted Functional Partners:
LOC114857213
P53-induced death domain-containing protein 1-like.
    
 0.967
apaf1
Apoptotic peptidase activating factor 1.
    
 0.952
gabpb2
GA binding protein transcription factor subunit beta 2.
    
  0.872
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.862
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.862
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 0.862
xiap
X-linked inhibitor of apoptosis.
   
 0.838
cenpn
Centromere protein N.
   
 0.828
LOC114870705
Cytochrome c iso-1/iso-2.
   
 0.822
cenpi
Centromere protein I.
   
 0.821
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.