STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setd4SET domain containing 4. (446 aa)    
Predicted Functional Partners:
suclg2
succinate-CoA ligase GDP-forming beta subunit.
   
 0.898
sucla2
succinate-CoA ligase ADP-forming beta subunit.
   
 0.845
suclg1
succinate-CoA ligase alpha subunit.
   
 
 0.823
cs
Citrate synthase.
    
 0.807
rbks
Ribokinase.
    
 0.800
mdh2
Malate dehydrogenase 2.
     
 0.798
mmaa
Metabolism of cobalamin associated A.
    
 0.747
mindy1
MINDY lysine 48 deubiquitinase 1.
    
 0.747
mindy2
MINDY lysine 48 deubiquitinase 2.
    
 0.747
ACLY
ATP citrate lyase.
   
 0.721
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.