STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114843751Circadian-associated transcriptional repressor-like. (437 aa)    
Predicted Functional Partners:
bhlhe41
Basic helix-loop-helix family member e41.
    
 
 0.486
c11h6orf62
Chromosome 11 C6orf62 homolog.
      
 0.438
per1
Period circadian regulator 1.
   
 
 0.434
LOC114868056
Period circadian protein homolog 2-like.
   
 
 0.434
per3
Period circadian regulator 3.
   
 
 0.434
LOC114844717
Period circadian protein homolog 2-like.
   
 
 0.434
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.424
LOC114843374
Zinc finger protein Xfin-like.
  
     0.412
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.