STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc40a1Solute carrier family 40 member 1. (568 aa)    
Predicted Functional Partners:
LOC114843090
Solute carrier family 40 member 1-like.
  
  
 
0.843
LOC114853114
Ceruloplasmin-like.
    
 0.797
LOC114864453
Coagulation factor VIII-like.
    
 0.748
f5
Coagulation factor V.
    
 0.748
RS1
Retinoschisin-like.
    
 0.721
LOC114846854
Neuropilin-2-like.
    
 0.721
tfr2
Transferrin receptor 2.
      
 0.463
LOC114856031
Natural resistance-associated macrophage protein 2-like.
      
 0.439
LOC114853573
Transferrin receptor protein 1-like.
      
 0.435
LOC114847819
Cytochrome b reductase 1.
      
 0.429
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.