STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842906Polyhomeotic-like protein 1. (772 aa)    
Predicted Functional Partners:
LOC114860152
F-box/LRR-repeat protein 19-like.
    
 0.717
kdm2a
Lysine demethylase 2A.
    
 0.717
LOC114866505
Lysine-specific demethylase 2B-like.
    
 0.717
LOC114851203
Lysine-specific demethylase 2A-like.
    
 0.717
LOC114862268
Lysine-specific demethylase 2B-like.
    
 0.717
c9
Complement C9.
   
 0.686
bard1
BRCA1 associated RING domain 1.
    
  0.685
c8b
Complement C8 beta chain.
   
 0.674
ENSBSLP00000018372
annotation not available
   
 0.673
cfp
Complement factor properdin.
   
 0.658
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.