STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114855805Msx2-interacting protein-like. (3189 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 0.862
mettl3
Methyltransferase like 3.
    
 0.838
zc3h13
Zinc finger CCCH-type containing 13.
   
 0.792
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.772
LOC114848343
Recombining binding protein suppressor of hairless-like.
    
 
 0.772
cbll1
Cbl proto-oncogene like 1.
     
 0.767
thoc2
THO complex 2.
   
 0.766
LOC114849663
Basic proline-rich protein-like.
    
 0.741
virma
Vir like m6A methyltransferase associated.
    
 0.741
ENSBSLP00000018947
annotation not available
    
 0.738
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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