STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
armc8Armadillo repeat containing 8. (673 aa)    
Predicted Functional Partners:
LOC114864745
E3 ubiquitin-protein transferase RMND5B-like.
    
 0.988
maea
Macrophage erythroblast attacher.
    
 0.987
LOC114850164
WD repeat-containing protein 26.
    
 0.985
LOC114842738
WD repeat-containing protein 26-like.
    
 0.985
LOC114858749
Glucose-induced degradation protein 8-B homolog.
    
 0.983
ranbp10
RAN binding protein 10.
   
 0.983
ranbp9
RAN binding protein 9.
   
 0.983
GID8
Glucose-induced degradation protein 8-B homolog.
    
 0.983
GID4
Glucose-induced degradation protein 4 homolog.
    
 0.981
GID4-2
GID complex subunit 4 homolog.
    
 0.981
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.