STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114845155D-threo-3-hydroxyaspartate dehydratase-like. (370 aa)    
Predicted Functional Partners:
sorl1
Sortilin related receptor 1.
    
 0.823
LOC114850021
Lactoylglutathione lyase-like.
    
  0.815
GLO1
Glyoxalase I.
    
  0.815
LOC114866283
Probable 2-ketogluconate reductase.
     
 0.747
LOC114864829
Glyoxylate reductase/hydroxypyruvate reductase-like.
     
 0.747
LOC114854063
Glyoxylate reductase/hydroxypyruvate reductase-like.
     
 0.747
LOC114847383
Probable 2-ketogluconate reductase.
     
 0.747
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.707
ntf3
Neurotrophin 3.
    
 0.707
LOC114859825
Neurotrophin-3-like.
    
 0.707
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.