STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858805Neural cell adhesion molecule L1.1-like. (1286 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
0.912
ncam2
Neural cell adhesion molecule 2.
   
0.844
LOC114869981
Neural cell adhesion molecule 1-like.
   
0.844
ncam1
Neural cell adhesion molecule 1.
   
0.844
LOC114843642
Neural cell adhesion molecule 1-like.
   
0.788
ENSBSLP00000056716
annotation not available
   
 0.788
nrp1
Neuropilin 1.
    
 0.746
ptprg
Protein tyrosine phosphatase receptor type G.
    
 
 0.709
ptprz1
Protein tyrosine phosphatase receptor type Z1.
    
 
 0.709
cntn1
Contactin 1.
    
0.701
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.