STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000050855Diphthamine biosynthesis 6. (295 aa)    
Predicted Functional Partners:
dph5
Diphthamide biosynthesis 5.
  
 
 0.935
gmps
Guanine monophosphate synthase.
    
 0.878
LOC114853883
Elongation factor 2-like.
    
 0.829
LOC114844566
Elongation factor 2.
    
 0.829
itpa
Inosine triphosphatase.
   
 
  0.819
gfm1
G elongation factor mitochondrial 1.
    
 0.801
EFL1
Elongation factor like GTPase 1.
    
 0.801
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 0.801
ADCY9
Adenylate cyclase 9.
    
  0.763
LOC114851174
Adenylate cyclase type 9-like.
    
  0.763
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.