STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114848050Spectrin beta chain, erythrocytic-like. (2363 aa)    
Predicted Functional Partners:
LOC114869139
Spectrin beta chain, non-erythrocytic 1-like.
  
  
 
0.927
ENSBSLP00000020872
annotation not available
   
 0.778
LOC114862152
Ankyrin-1-like.
   
 0.778
LOC114846020
Ankyrin-3-like.
   
 0.778
LOC114870660
Ankyrin-3-like.
   
 0.778
LOC114866512
Ankyrin-1-like.
   
 0.778
LOC114857232
Ankyrin-2-like.
   
 0.778
LOC114861840
Ankyrin repeat and death domain-containing protein 1A-like.
   
 0.774
LOC114856019
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like.
   
 0.739
ankrd52
Ankyrin repeat domain 52.
   
 0.739
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.