STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114844055Deoxyribodipyrimidine photo-lyase-like. (552 aa)    
Predicted Functional Partners:
timeless
Timeless circadian regulator.
    
 0.842
LOC114868056
Period circadian protein homolog 2-like.
   
 0.808
per3
Period circadian regulator 3.
   
 0.808
LOC114844717
Period circadian protein homolog 2-like.
   
 0.808
per1
Period circadian regulator 1.
   
 0.804
sod2
Superoxide dismutase 2.
  
   0.676
LOC114857314
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.619
ARNTL2
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
    
 0.619
LOC114856979
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.619
LOC114843536
Aryl hydrocarbon receptor nuclear translocator-like.
    
 0.617
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.