STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
miga1Mitoguardin 1. (598 aa)    
Predicted Functional Partners:
nexn
Nexilin F-actin binding protein.
 
   
 0.843
miga2
Mitoguardin 2.
  
 
 
0.763
dpm3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
 0.669
surf6
Surfeit 6.
     
 0.655
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
      
 0.554
LOC114864418
Magnesium transporter protein 1.
   
 
  0.532
LOC114855276
Tumor suppressor candidate 3.
   
 
  0.532
zzz3
Zinc finger ZZ-type containing 3.
      
 0.522
mfsd6
Major facilitator superfamily domain containing 6.
      
 0.499
wdr20
WD repeat domain 20.
    
 
 0.479
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.