STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG28Ergosterol biosynthesis 28 homolog. (150 aa)    
Predicted Functional Partners:
LOC114866236
Lanosterol 14-alpha demethylase.
   
 
 0.984
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 
 0.978
lss
Lanosterol synthase.
   
 
 0.976
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 
 0.976
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 
 0.973
r3hdm4
R3H domain containing 4.
   
 
 0.949
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
 
 0.934
dhcr7
7-dehydrocholesterol reductase.
   
 
 0.929
lbr
Lamin B receptor.
   
 
 0.929
tm7sf2
Transmembrane 7 superfamily member 2.
   
 
 0.929
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.