STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114852173MAPK regulated corepressor interacting protein 2-like. (162 aa)    
Predicted Functional Partners:
lsm12
LSM12 homolog.
    
   0.602
LOC114856113
Cytochrome c1, heme protein, mitochondrial.
   
    0.599
LOC114865426
Probable ATP-dependent RNA helicase ddx6.
    
 
 0.449
LOC114843207
Probable ATP-dependent RNA helicase DDX6.
    
 
 0.449
ddx6
DEAD-box helicase 6.
    
 
 0.449
ndufv1
NADH:ubiquinone oxidoreductase core subunit V1.
   
    0.424
ENSBSLP00000044531
annotation not available
   
    0.424
LOC114864313
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like.
   
    0.422
NDUFS8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like.
   
    0.422
atp5f1d
ATP synthase F1 subunit delta.
   
    0.408
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.