STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamp2Lysosomal associated membrane protein 2. (404 aa)    
Predicted Functional Partners:
lamp1
Lysosomal associated membrane protein 1.
  
0.991
LOC114846761
Lysosome-associated membrane glycoprotein 1-like.
  
0.991
cd63
CD63 molecule.
    
 0.866
lamp3
Lysosomal associated membrane protein 3.
     
0.840
rptor
Regulatory associated protein of MTOR complex 1.
    
 
 0.689
nprl3
NPR3 like, GATOR1 complex subunit.
    
 
 0.666
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.661
mios
Meiosis regulator for oocyte development.
    
 
 0.646
kptn
Kaptin, actin binding protein.
    
 
 0.644
wdr24
WD repeat domain 24.
    
 
 0.642
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.