STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL12Kelch like family member 12. (618 aa)    
Predicted Functional Partners:
LOC114868724
Cullin-3.
    
 0.907
CUL3
Cullin-3-like.
    
 0.907
pef1
penta-EF-hand domain containing 1.
    
 0.859
sec31a
SEC31 homolog A, COPII coat complex component.
    
 0.815
pdcd6
Programmed cell death 6.
    
 0.807
klhl7
Kelch like family member 7.
  
 
 
0.799
LOC114856205
Protein SEC13 homolog.
    
 0.795
LOC114855753
Protein SEC13 homolog.
    
 0.795
klhl20
Kelch like family member 20.
  
 
 
0.793
klhl8
Kelch like family member 8.
  
 
 
0.792
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.