STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celsr3Cadherin EGF LAG seven-pass G-type receptor 3. (3412 aa)    
Predicted Functional Partners:
LOC114851078
Vang-like protein 2.
    
 0.542
ENSBSLP00000047503
annotation not available
    
 0.542
LOC114844689
Vang-like protein 2.
    
 0.542
prickle2
Prickle planar cell polarity protein 2.
   
 0.523
VANGL1
VANGL planar cell polarity protein 1.
    
 0.510
LOC114847419
Vang-like protein 1.
    
 0.510
LOC114856240
Cytochrome b-c1 complex subunit 1, mitochondrial.
 
   
  0.486
fat3
FAT atypical cadherin 3.
   
0.478
PRICKLE1
Prickle planar cell polarity protein 1.
   
 0.473
pmpcb
Peptidase, mitochondrial processing beta subunit.
 
   
  0.469
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.