STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr35WD repeat domain 35. (1184 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
  
0.999
ift140
Intraflagellar transport 140.
    
 0.999
ttc21b
Tetratricopeptide repeat domain 21B.
   
 0.997
IFT43
Intraflagellar transport 43.
    
 0.997
ift80
Intraflagellar transport 80.
  
 0.990
ttc26
Tetratricopeptide repeat domain 26.
  
 
 0.973
cluap1
Clusterin associated protein 1.
  
  
 0.973
ift88
Intraflagellar transport 88.
  
  
 0.968
LOC114860524
Tetratricopeptide repeat protein 30A-like.
   
 
 0.965
ift46
Intraflagellar transport 46.
     
 0.964
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.