STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dync2li1Dynein cytoplasmic 2 light intermediate chain 1. (394 aa)    
Predicted Functional Partners:
wdr34
WD repeat domain 34.
    
 0.994
tctex1d2
Tctex1 domain containing 2.
   
 0.979
LOC114844337
Cytoplasmic dynein 1 intermediate chain 2-like.
    
 0.973
TCTEX1D1
Tctex1 domain containing 1.
   
 0.966
dynlt1
Dynein light chain Tctex-type 1.
    
 0.965
DYNLT3
Dynein light chain Tctex-type 3.
    
 0.965
ENSBSLP00000001356
Dynein, light chain, roadblock-type 1.
    
 0.960
dynlrb2
Dynein light chain roadblock-type 2.
    
 0.960
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
   
 
 0.959
LOC114865782
Cytoplasmic dynein 1 light intermediate chain 1-like.
   
 
 0.959
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.