STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000052398annotation not available (785 aa)    
Predicted Functional Partners:
LOC114846581
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3-like.
     
 0.829
PLCB2
Phospholipase C beta 2.
     
 0.825
PLCB4
Phospholipase C beta 4.
     
 0.796
wdr90
WD repeat domain 90.
    
   0.643
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
    
  0.579
LOC114859789
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.
    
 0.542
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.494
LOC114859444
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
    
 0.470
gnat1
G protein subunit alpha transducin 1.
    
 0.470
trio
Trio Rho guanine nucleotide exchange factor.
    
  0.469
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.