STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trmt11tRNA methyltransferase 11 homolog. (466 aa)    
Predicted Functional Partners:
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.997
mettl1
Methyltransferase like 1.
   
 0.983
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.981
trmt6
tRNA methyltransferase 6.
   
 0.980
trmt61a
tRNA methyltransferase 61A.
   
 
 0.979
wdr4
WD repeat domain 4.
   
 
 0.978
trmt61b
tRNA methyltransferase 61B.
   
 
 0.976
mettl27
Methyltransferase like 27.
   
 0.934
dus1l
Dihydrouridine synthase 1 like.
  
  
 0.886
trmt9b
tRNA methyltransferase 9B (putative).
   
 0.872
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.