STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853214Tyrosine-protein kinase ZAP-70-like. (610 aa)    
Predicted Functional Partners:
LOC114848647
T-cell surface glycoprotein CD3 zeta chain-like.
   
 0.987
cd3e
CD3e molecule.
   
 0.968
ENSBSLP00000047985
annotation not available
   
 0.954
ENSBSLP00000056054
annotation not available
   
 0.947
plcg1
Phospholipase C gamma 1.
   
0.944
cd3g
CD3g molecule.
  
 0.929
LOC114841959
B-cell linker protein-like.
   
 0.902
cd8a
CD8a molecule.
   
 0.885
LOC114842934
T-cell surface glycoprotein CD4-like.
   
 0.878
ENSBSLP00000003417
Si:ch211-130m23.5.
  
 0.870
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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