STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114845931Homeobox protein HMX3-B-like. (290 aa)    
Predicted Functional Partners:
ENSBSLP00000007473
ISY1 splicing factor homolog.
    
   0.661
ppp1r21
Protein phosphatase 1 regulatory subunit 21.
    
   0.661
hinfp
Histone H4 transcription factor.
    
   0.622
LOC114868556
Histone H4 transcription factor-like.
    
   0.622
LOC114850173
Dystrobrevin beta-like.
   
   0.593
dtna
Dystrobrevin alpha.
   
   0.593
dtnb
Dystrobrevin beta.
   
   0.593
tbx1
T-box transcription factor 1.
    
 
 0.488
LOC114868160
T-box transcription factor TBX1-A-like.
    
 
 0.488
LOC114849281
T-box transcription factor TBX18-like.
    
 
 0.417
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.