STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114849753Clavesin-2. (333 aa)    
Predicted Functional Partners:
ap1g1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.653
sdr16c5
Short chain dehydrogenase/reductase family 16C member 5.
    
  0.592
rdh10
Retinol dehydrogenase 10.
    
  0.592
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.547
LOC114844571
AP-1 complex subunit gamma-1-like.
    
 0.522
LOC114867906
Clathrin heavy chain 1-like.
     
 0.496
LOC114861976
Clathrin heavy chain 1-like.
     
 0.496
cltc
Clathrin heavy chain.
     
 0.496
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.477
LOC114864625
SLAIN motif-containing protein-like.
    
 
 0.454
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.