STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846114Protein FRA10AC1. (334 aa)    
Predicted Functional Partners:
cwc27
CWC27 spliceosome associated cyclophilin.
   
   0.737
ess2
Ess-2 splicing factor homolog.
    
 
 0.686
ik
IK cytokine.
   
   0.620
cherp
Calcium homeostasis endoplasmic reticulum protein.
    
 
 0.619
sf3b2
Splicing factor 3b subunit 2.
    
   0.609
leng1
Leukocyte receptor cluster member 1.
    
   0.575
wnk2
WNK lysine deficient protein kinase 2.
    
  0.531
LOC114858254
Serine/threonine-protein kinase WNK2-like.
    
  0.531
zrsr2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 
 0.528
engase
endo-beta-N-acetylglucosaminidase.
      
 0.528
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.