STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870432Paired box protein Pax-2a. (409 aa)    
Predicted Functional Partners:
LOC114866948
Protein C-ets-1-like.
   
 
 0.662
ets1
ETS proto-oncogene 1, transcription factor.
   
 
 0.662
LOC114843322
Protein C-ets-1-like.
   
 
 0.662
LOC114868335
Homeobox protein goosecoid-2-like.
    
 
 0.649
gsc
Goosecoid homeobox.
    
 
 0.649
cbfb
Core-binding factor subunit beta.
     
 0.617
LOC114848842
Runt-related transcription factor 1-like.
    
 0.607
runx2
RUNX family transcription factor 2.
    
 0.606
LOC114848183
Runt-related transcription factor 3-like.
    
 0.606
ENSBSLP00000048009
annotation not available
    
 0.600
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.