STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csnk1g2Casein kinase 1 gamma 2. (449 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor.
    
 0.841
ENSBSLP00000014214
annotation not available
    
0.829
csnk1a1
Casein kinase 1 alpha 1.
   
 
 
0.787
cert1
Ceramide transporter 1.
    
 0.729
LOC114866613
Collagen type IV alpha-3-binding protein-like.
    
 0.729
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
    
0.669
prkaca
Protein kinase cAMP-activated catalytic subunit alpha.
    
0.669
LOC114861092
cAMP-dependent protein kinase catalytic subunit alpha.
    
0.669
grk4
G protein-coupled receptor kinase 4.
     
 0.631
grk6
G protein-coupled receptor kinase 6.
     
0.631
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.