STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854245Nuclear receptor subfamily 2 group F member 6-like. (407 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.681
ncor1
Nuclear receptor corepressor 1.
    
 0.681
med1
Mediator complex subunit 1.
    
  0.678
hsp90b1
Heat shock protein 90 beta family member 1.
   
 0.581
ano8
Anoctamin 8.
      
 0.542
LOC114844443
Anoctamin-8-like.
      
 0.539
rpl9
Ribosomal protein L9.
    
  0.536
LOC114855065
Nuclear receptor coactivator 3-like.
    
 0.522
nrip1
Nuclear receptor interacting protein 1.
    
 0.515
NCOA3
Nuclear receptor coactivator 3-like.
    
 0.514
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.