STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdap1l1Ganglioside induced differentiation associated protein 1 like 1. (333 aa)    
Predicted Functional Partners:
pex16
Peroxisomal biogenesis factor 16.
     
 0.725
pex19
Peroxisomal biogenesis factor 19.
     
 0.716
LOC114862801
ATPase family AAA domain-containing protein 1-A-like.
     
 0.682
atad1
ATPase family AAA domain containing 1.
     
 0.682
pex3
Peroxisomal biogenesis factor 3.
     
 0.661
pex12
Peroxisomal biogenesis factor 12.
     
 0.659
pex13
Peroxisomal biogenesis factor 13.
     
 0.656
pex14
Peroxisomal biogenesis factor 14.
     
 0.642
LOC114861723
ATP-binding cassette sub-family D member 2-like.
     
 0.639
LOC114858798
ATP-binding cassette sub-family D member 1-like.
     
 0.639
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.