STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL49Mitochondrial ribosomal protein L49. (165 aa)    
Predicted Functional Partners:
ENSBSLP00000013136
Mitochondrial ribosomal protein L36.
   
 
 0.997
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.997
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.996
mrpl27
Mitochondrial ribosomal protein L27.
   
   0.996
dap3
Death associated protein 3.
   
 
 0.996
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.995
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.995
LOC114857384
39S ribosomal protein L23, mitochondrial-like.
   
 
 0.993
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.993
mrpl17
Mitochondrial ribosomal protein L17.
   
 
 0.993
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.