STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgmtO-6-methylguanine-DNA methyltransferase. (184 aa)    
Predicted Functional Partners:
ogg1
8-oxoguanine DNA glycosylase.
  
 
 0.897
trip12
Thyroid hormone receptor interactor 12.
    
 
 0.726
msh6
mutS homolog 6.
   
 
 0.664
mlh1
mutL homolog 1.
   
 
 0.640
mre11
MRE11 homolog, double strand break repair nuclease.
  
  
 0.640
mpg
N-methylpurine DNA glycosylase.
     
 0.637
nthl1
Nth like DNA glycosylase 1.
     
 0.631
mutyh
mutY DNA glycosylase.
     
 0.614
mrpl58
Mitochondrial ribosomal protein L58.
     
 0.613
nudt15
Nudix hydrolase 15.
     
 0.611
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.