STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870744Disintegrin and metalloproteinase domain-containing protein 12-like. (957 aa)    
Predicted Functional Partners:
LOC114859586
Leucine-rich repeat LGI family member 2-like.
    
 0.580
rasa1
RAS p21 protein activator 1.
    
  0.531
LOC114854362
SH3 and PX domain-containing protein 2A-like.
    
 0.501
SH3PXD2A
SH3 and PX domains 2A.
    
 0.501
sh3pxd2b
SH3 and PX domains 2B.
    
 0.497
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
  0.460
ENSBSLP00000016672
annotation not available
     
 0.455
lgi2
Leucine rich repeat LGI family member 2.
     
 0.455
ENSBSLP00000005248
annotation not available
   
  0.417
LOC114866919
Disks large homolog 4-like.
   
  0.417
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.