STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8TBC1 domain family member 8. (1121 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 
  0.983
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
   
 
  0.673
yipf6
Yip1 domain family member 6.
   
 
  0.639
LOC114859424
Sortilin-like.
    
  0.638
LOC114855942
Sortilin-like.
    
  0.638
ap1b1
Adaptor related protein complex 1 subunit beta 1.
   
 
  0.635
LOC114869082
AP-1 complex subunit beta-1.
   
 
  0.635
igf2r
Insulin like growth factor 2 receptor.
   
 
  0.631
ap4b1
Adaptor related protein complex 4 subunit beta 1.
   
 
  0.630
hip1r
Huntingtin interacting protein 1 related.
   
 
  0.622
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.