STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhpn2Rhophilin Rho GTPase binding protein 2. (685 aa)    
Predicted Functional Partners:
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.948
LOC114857718
Charged multivesicular body protein 4b-like.
    
 0.822
LOC114852978
Charged multivesicular body protein 4c-like.
    
 0.822
LOC114858940
Charged multivesicular body protein 4b.
    
 0.822
LOC114855998
Charged multivesicular body protein 4b-like.
    
 0.822
LOC114851903
Multivesicular body subunit 12A-like.
     
 0.720
stam2
Signal transducing adaptor molecule 2.
   
 0.675
stam
Signal transducing adaptor molecule.
   
 0.675
LOC114854233
Charged multivesicular body protein 5.
    
 0.658
chmp5
Charged multivesicular body protein 5.
    
 0.658
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.