STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114855277Polyhomeotic-like protein 2. (895 aa)    
Predicted Functional Partners:
cbx6
Chromobox 6.
    
 0.725
LOC114847134
Chromobox protein homolog 8-like.
    
 0.719
LOC114860488
Chromobox protein homolog 8-like.
    
 0.719
pcgf5
Polycomb group ring finger 5.
    
 0.718
LOC114860152
F-box/LRR-repeat protein 19-like.
    
 0.717
kdm2a
Lysine demethylase 2A.
    
 0.717
LOC114866505
Lysine-specific demethylase 2B-like.
    
 0.717
LOC114851203
Lysine-specific demethylase 2A-like.
    
 0.717
LOC114862268
Lysine-specific demethylase 2B-like.
    
 0.717
c9
Complement C9.
   
 0.704
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.