STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgm2Phosphoglucomutase 2. (623 aa)    
Predicted Functional Partners:
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.940
LOC114844395
Phosphoglucomutase-1-like.
  
 0.927
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.924
otc
Ornithine carbamoyltransferase.
  
 
 0.916
LOC114842036
UTP--glucose-1-phosphate uridylyltransferase-like.
  
 0.915
LOC114862632
Phosphoglucomutase-like protein 5.
  
 0.901
mpi
Mannose phosphate isomerase.
  
 
 0.900
gmppb
GDP-mannose pyrophosphorylase B.
  
 
 0.899
gmppa
GDP-mannose pyrophosphorylase A.
  
 
 0.899
dera
Deoxyribose-phosphate aldolase.
  
 
 0.893
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.