STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itfg1Integrin alpha FG-GAP repeat containing 1. (623 aa)    
Predicted Functional Partners:
phkb
Phosphorylase kinase regulatory subunit beta.
   
  
 0.533
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.527
pomp
Proteasome maturation protein.
      
 0.499
ruvbl2
RuvB like AAA ATPase 2.
    
 
 0.486
ckap5
Cytoskeleton associated protein 5.
    
 
 0.466
ruvbl1
RuvB like AAA ATPase 1.
    
 
 0.429
pdcd2
Programmed cell death 2.
      
 0.416
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.