STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coq6Coenzyme Q6, monooxygenase. (500 aa)    
Predicted Functional Partners:
coq3
Coenzyme Q3, methyltransferase.
 
 
 0.991
coq9
Coenzyme Q9.
   
 0.988
coq4
Coenzyme Q4.
 
 
 0.982
coq7
Coenzyme Q7, hydroxylase.
 
 
 0.978
coq5
Coenzyme Q5, methyltransferase.
   
 0.976
coq2
Coenzyme Q2, polyprenyltransferase.
  
  
 0.926
lss
Lanosterol synthase.
  
 
 0.918
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.909
kynu
Kynureninase.
  
 
 0.906
fads2
Fatty acid desaturase 2.
  
 
 0.876
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.