STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842471Serum paraoxonase/arylesterase 2-like. (353 aa)    
Predicted Functional Partners:
LOC114857615
Phosphatidylcholine-sterol acyltransferase-like.
   
 
 0.955
LOC114849542
Apolipoprotein B-100-like.
   
 
 0.952
cetp
Cholesteryl ester transfer protein.
     
 0.943
apom
Apolipoprotein M.
   
 
 0.940
pla2g7
Phospholipase A2 group VII.
     
 0.935
ENSBSLP00000050969
annotation not available
   
 
 0.932
lpl
Lipoprotein lipase.
     
 0.923
ENSBSLP00000035663
annotation not available
     
 0.915
selenos
Selenoprotein S.
   
 
  0.909
clu
Clusterin.
    
 0.886
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.