STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000055743Vesicle-associated membrane protein 2. (126 aa)    
Predicted Functional Partners:
LOC114852798
Intersectin-2-like.
     
 0.985
itsn2
Intersectin 2.
     
 0.985
gak
Cyclin G associated kinase.
   
 
  0.982
snap25
Synaptosome associated protein 25.
   
 0.960
LOC114852098
Synaptosomal-associated protein 25-B.
   
 0.960
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.949
snap23
Synaptosome associated protein 23.
   
 0.942
stx16
Syntaxin 16.
   
 0.937
LOC114864039
Syntaxin-3-like.
   
 0.937
LOC114862414
Syntaxin-2-like.
   
 0.937
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.