STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo5F-box protein 5. (442 aa)    
Predicted Functional Partners:
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.910
lss
Lanosterol synthase.
   
 0.901
cdc20b
Cell division cycle 20B.
  
 0.897
cdc20
Cell division cycle 20.
  
 0.897
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.897
skp1
S-phase kinase associated protein 1.
    
 0.895
cul1
Cullin 1.
    
 0.884
rps2
Ribosomal protein S2.
    
 0.881
ENSBSLP00000002927
Cysteine three histidine 1.
   
 0.872
LOC114865037
F-box/WD repeat-containing protein 11.
    
 0.853
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.