STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114855041Band 4.1-like protein 1. (1327 aa)    
Predicted Functional Partners:
LOC114870611
Peripheral plasma membrane protein CASK-like.
   
 0.753
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.753
gps1
G protein pathway suppressor 1.
    
  0.671
hspa5
Heat shock protein family A (Hsp70) member 5.
    
  0.670
cops5
COP9 signalosome subunit 5.
    
  0.670
cops2
COP9 signalosome subunit 2.
    
  0.664
COPS6
COP9 signalosome subunit 6.
    
  0.663
cops8
COP9 signalosome subunit 8.
    
  0.659
basp1
Brain abundant membrane attached signal protein 1.
    
  0.657
cops4
COP9 signalosome subunit 4.
    
  0.653
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.