STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hacd23-hydroxyacyl-CoA dehydratase 2. (243 aa)    
Predicted Functional Partners:
LOC114854026
Very-long-chain enoyl-CoA reductase-like.
   
 0.968
tecr
trans-2,3-enoyl-CoA reductase.
   
 0.962
LOC114861094
Very-long-chain enoyl-CoA reductase-like.
   
 0.962
LOC114856970
Very-long-chain 3-oxoacyl-CoA reductase-A-like.
   
 0.950
hsd17b12
Hydroxysteroid 17-beta dehydrogenase 12.
   
 0.950
skp1
S-phase kinase associated protein 1.
    
 0.950
LOC114869756
Very-long-chain 3-oxoacyl-CoA reductase-like.
   
 0.950
elovl5
ELOVL fatty acid elongase 5.
    
 0.876
LOC114842966
Glutathione S-transferase kappa 1-like.
    
 0.864
ENSBSLP00000032570
ELOVL fatty acid elongase 8b.
    
 0.860
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.