STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857024Microtubule-associated protein 1A-like. (3972 aa)    
Predicted Functional Partners:
fmr1
FMRP translational regulator 1.
    
 
 0.596
fxr1
FMR1 autosomal homolog 1.
    
 
 0.566
LOC114867071
Fragile X mental retardation syndrome-related protein 1-like.
    
 
 0.566
ENSBSLP00000001361
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.529
map1lc3b
Microtubule associated protein 1 light chain 3 beta.
    
 0.529
map1lc3c
Microtubule associated protein 1 light chain 3 gamma.
    
 0.478
LOC114848497
Uncharacterized LOC114848497.
  
     0.464
gabarapl2
GABA type A receptor associated protein like 2.
    
 0.449
GABARAPL2
GABA type A receptor associated protein like 2.
    
 0.449
gabarap
GABA type A receptor-associated protein.
    
 0.448
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.