STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shisa3Shisa family member 3. (275 aa)    
Predicted Functional Partners:
vopp1
VOPP1 WW domain binding protein.
      
 0.541
eepd1
Endonuclease/exonuclease/phosphatase family domain containing 1.
      
 0.478
LOC114866636
WW domain-binding protein 1-like.
      
 0.463
cfap299
Cilia and flagella associated protein 299.
      
 0.441
plekhh2
Pleckstrin homology, MyTH4 and FERM domain containing H2.
      
 0.431
tmem33
Transmembrane protein 33.
      
 0.420
SYNDIG1
Synapse differentiation inducing 1.
      
 0.414
shisal1
Shisa like 1.
      
 0.408
tmem132e
Transmembrane protein 132E.
  
     0.406
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.