STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd4Potassium channel tetramerization domain containing 4. (258 aa)    
Predicted Functional Partners:
tfap2a
Transcription factor AP-2 alpha.
   
 0.542
tfap2e
Transcription factor AP-2 epsilon.
   
 0.542
tfap2b
Transcription factor AP-2 beta.
   
 0.542
tfap2d
Transcription factor AP-2 delta.
   
 0.542
LOC114855509
Transcription factor AP-2 gamma-like.
   
 0.542
LOC114860313
SUMO-conjugating enzyme UBC9-like.
    
 
 0.512
kctd2
Potassium channel tetramerization domain containing 2.
    
 
0.512
ube2i
Ubiquitin conjugating enzyme E2 I.
    
 
 0.512
cacul1
CDK2 associated cullin domain 1.
    
 0.472
LOC114868724
Cullin-3.
    
 0.472
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.