STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000056273Erythrocyte membrane protein band 4.1 like 4B. (487 aa)    
Predicted Functional Partners:
LOC114870611
Peripheral plasma membrane protein CASK-like.
   
 0.984
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.984
prkcz
Protein kinase C zeta.
    
 0.885
prkci
Protein kinase C iota.
    
 0.885
arhgef18
Rho/Rac guanine nucleotide exchange factor 18.
     
 0.839
LOC114844026
Rho guanine nucleotide exchange factor 18-like.
     
 0.839
LOC114865675
Tyrosine-protein phosphatase non-receptor type 2-like.
 
      0.667
ptpn2
Protein tyrosine phosphatase non-receptor type 2.
 
      0.619
LOC114865767
MAGUK p55 subfamily member 6-like.
 
  
 0.595
LOC114860632
MAGUK p55 subfamily member 2-like.
 
  
 0.595
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.