STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000056402Junctional cadherin 5 associated a. (1223 aa)    
Predicted Functional Partners:
LOC114843102
Uncharacterized LOC114843102.
  
     0.491
LOC114858521
Mucin-12-like.
  
     0.487
ENSBSLP00000038570
annotation not available
  
     0.484
LOC114861178
Zinc finger and BTB domain-containing protein 45-like.
  
     0.480
LOC114843006-2
Protein SOGA3-like.
  
     0.474
bicral
BRD4 interacting chromatin remodeling complex associated protein like.
  
     0.469
ahdc1
AT-hook DNA binding motif containing 1.
  
     0.464
LOC114856833
Uncharacterized LOC114856833.
  
     0.440
LOC114847515
Interleukin-1 receptor type 2-like.
  
     0.437
etaa1
ETAA1 activator of ATR kinase.
  
     0.436
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.